COMRAD - Cattle Comparative Radiation Hybrid Map

Marker Table for Chromosome 13

Framework
markers
Marker IDPrimer 1Primer 2Retention
Frequency
Gene Names
 ABS10 GGAGTGAGACAGGGGTGTGT TGGCATCCATTCATCCATCT 0.172   
F1 AF2 CTGAGCGACTGAACTGATAGC GTTGGAACTGCCAGAGACTAG 0.247   
 AGLA232 CCTTTGCAAATACCTCCTGACCAG AATGGTTCTACATTTGCTAGGTGTC 0.172   
 BL1071 AGAAGGACAGAGACCACAGGC TTGAGGTGAAGAGGTCCACC 0.163   
 BL42 CAAGGTCAAGTCCAAATGCC GCATTTTTGTGTTAATTTCATGC 0.223   
F3 BM1602 ATTCAGCAATTCTACTCCAGGG CCAACACCACAGTTCAAAAGC 0.187   
 BM4509 TTTATTTCCTGTCTTTGAGGCA ATCTGTGGTCTTCCTAAACCAA 0.194   
 BM720 ACATCTCATTCTTGTGTCATGG GAAATTGACTTTAGGGTTCCCC 0.181   
 BMC1222 CCAATTTTGCAGATAAGAAAACA CCTGAGTGTTCCTCCTGAGT 0.247   
 BMS1145 CAACATTTGGATTGTGATGTCC TACTGTGTCATGTGCTTTGGC 0.326   
 BMS1226 CGGAAGAAGACAAAGAATGAGC ATGAAATGACACCACCCTCC 0.181   
 BMS1231 CATTGGTGTTGGTGTGGTATG GCACAGATATTTGGTGACAAGG 0.304   
 BMS1352 GACTCCAGGTGCAGGAAGAG TCTGCAAGGAATGACAGTGC 0.287   
 BMS1580 GGTACCATGTGCAAGCAGG CCATCCCATTAGCTGTAAGAGG 0.196   
F1 BMS1742 GTGTGCCAGCAAGAAAGAGT TCCACCTGATTTATTTTGGC 0.237   
 BMS1784 CTGAAGCCAAGAATCAAGGTG AGCAGGGTCAGTGCTGATG 0.132   
 BMS6548 CGTTTTGGGAGTTTTCTTATGG TAGCATGCACACATACACGC 0.17   
F3 BMS813 GGCAAAACTTAACCAAACTGG CCCCATCTGTGAGAATTAAAAT 0.226   
 BMS995 AATTCTTCCAACCTCCAGTGC ACTTTTCAAGCAGGGCTCAC 0.16   
 DIK083 TGTGCATCTTGTCCAGTTTAG CCACCAATGCTCTCCTCTCA 0.237   
 DIK093 TCAGCCTCCACTGTTGGATG TGATTGAGTGCTTTCTACATGC 0.213   
 DIK54 GGATTTTGTTTTAGTGTATTGG TCAGCACTTCCATTGATTCC 0.194   
 ETH7 GTGAGACCCAGCTCCTGCCTGT CGGAGCAGGGTGTCAGAGCCG 0.181   
F2 HUJ616 TTCAAACTACACATTGACAGGG GGACCTTTGGCAATGGAAGG 0.149   
 IL2RA* GCTGATGTGGAGGTTCTTCGTATTC TCGGTGATGACTGAGGCAAAG 0.309 interleukin 2 receptor 
 ILSTS059 AGTATGGTAAGGCCAAAGGG CGACTTGTGTTGTTCAAAGC 0.319   
F2 ILSTS086 CAAGGAGCTTGACTTCCTGG TGTCTTGTTGTTAGCAACCC 0.191   
 JAB3 GCAAGGAGGACCCTGTGCG CCTAGTATCCAGTCTGTGTCC 0.149   
 MILSTS77 GATGAGCAAGACCATACAGC CTACTCATAATAGCCAAGCC 0.28   
F3 RM215 AGTCCAACATGAGTGAGCAACT AACACTTGGGGTTGTAAATTATCT 0.226   
 RM327 ATACGCCGCAAGAAATGATA GCAGTCCTGAGAGTAGTAAACTCTG 0.151   
 TGLA23 GAGACACAAGCTTTCAACCACC TGCCCCAGTTGATTTATTAAAAACA 0.234   
F1 TGLA6 TAGGCACAATGTCAATAATTTACTC AATTCTCCATGTTAAGGGTTTACCA 0.181   
 URB058 GTAAGGCTCTTTGAGGGTTAGG GCTTAGAAGTTTCTGTGCTGTC 0.204   
 URB07 GACTGCGAACAATATGCGTCCTG ACGATGGATGGAGTATGGAGGAG 0.191   
 UWCA21 CTAAACATTAGACCTGGGGGA CAAAGGGGTCACAAGGAGTCA 0.245   
F2 UWCA25 ACAATATGCGTCCTGGAGGAA TTCTGTGCTGTCTTTTCAGTCTTC 0.191   
 VIM* GCCCAGATTCAAGAACAGCATG CATTGTTGCGGTTAGCAGCTTC 0.217 vimentin 
Markers below are Not included in the map
 BMS9248 AGGAAGGAACATTTCCAAACTC TGCATATATTGAAGAATCCTTGTG 0.989   
  • Back to the chromosome panel
  • Data from http://www.projects.roslin.ac.uk/comrad/introduction.html
  • Contact: Dr John Williams
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