COMRAD - Cattle Comparative Radiation Hybrid Map

Marker Table for Chromosome 17

Framework
markers
Marker IDPrimer 1Primer 2Retention
Frequency
Gene Names
 6359 available on request   0.154   
 5COR GATCTGAGAACAGCAGGG CCCAGCAGCTTTCAACCT 0.213   
 9.5COR1 GACACAACTGAGTGACTAACTT CCATTTCCTCGCAAACTTACC 0.202   
F2 9.5COR3 GATCACTTAGTCAAACAC AGACCTTGGGTAAGTGAG 0.223   
F1 AF3(L6023) TAATACCTTCAGGGTCCATCC GAAACATCTAATGTCCATCATGAA 0.266   
F2 APOE1* CACTCTCTGGTTTCTCTTGC CCATGGATAGAGGAGTCTGG 0.191 apolipoprotein E 
 BM2078 CCCAAAAGAAGCCAGGAAG TCAGAGTTTGGGGTCCTCAG 0.191   
 BM6507 ACTTAGCACAATGCCCTCTAGG ATGTTATTCCATCAGGAGGAGC 0.223   
 BMS1322 TGATGCTGATTGATTTTGTGTG TATCTTTGCTCACTCTTTCCCC 0.266   
 BMS1355 TAAAACCCCAAAAAGAACCC ATATTTGCGACATTGGATGAA 0.202   
F1 BMS14 CAGCCGGTTGGAAATGAC GGCAAAACCAAATTAACCTCC 0.255   
F1 BMS2213 ATGGGCAGCTTAGGGATTG CTTCAAGAGCCTTCAGTGGG 0.277   
 BMS2559 ACCTGGGAGAGGACAATGTG CTCCAACATCGGTCCCAG 0.266   
F2 BMS2785 ACAAACCTGTGCGCCTTG GGCAATCAGTCGGACACAC 0.277   
 BMS3004 GGACAGAGGAGCCTGGTTG AGTTGCGTTGTTCATCATTCC 0.245   
F1 CDH3* CCCATACTTCAAGGTGAACAGC CCTGCAAGGAGCCCTGGATG 0.266 cadherin 3, P-cadherin 
F1 CYBA* GGACAGAAGTACCTGACC GAGGTGCAAGAAGGCCCG 0.33 cytochrome b-245, alpha polypeptide 
 DIK67 ACAGGTGATGCATGGGGTGG CCTATTTCCTAGTCACAGAGAC 0.287   
F2 ETLIN* CCGGCCAAGTGTGAGCTTG GGCTATTGCTGGTCACAGTC 0.266   
 HAUT14 TGACCTTCACTCATGTTATTAA CCAGGGAAGATGAAGTGACC 0.404   
F2 IDVGA55 GTGACTGTATTTGTGAACACCTA TCTAAAACGGAGGCAGAGATG 0.16   
F2 ILSTS002 TCTATACACATGTGCTGTGC CTTAGGGGTGAAGTGACACG 0.213   
 INRA185 TTACTGGGGAGACATACCAAGC CCCACACTAGGGAACCCC 0.298   
F2 KSCG GTCACCTGTCTCAGTGCTTTG GGTCACCGGCTACAGGACAG 0.138   
F1 MC1R* CAAGAACCGCAACCTGCACT GCCTGGGTGGCCAGGACA 0.245 melanocortin 1 receptor 
F1 MT2A* GCAGGACACTGACCGCACTTC TGTGACTTCTGTGGGCTCAGT 0.309 metallothionein 2 A 
 RYR117 CTGGACGTGCTGTGTTCC GATGAGGTTTGTCTGCAGC 0.149   
F2 RM128 GTGAGGAGGAGGGGCGAGGAG AGGCCTGTGAGAAGATGGTGAG 0.223   
 RME1 GTCTCCCTTCAGTGTTCCCA AGGTTGCTGGCTCCTTTTCT 0.128   
F1 SYB2* ACATGGCGGGGGCCAGCGGA TCTTCCCGTCCCGGGCAGCC 0.181 synaptobrevin 2 
F1 TEXAN10 TGTGGCTAGGTTCAAGCTCC TCTCTTCTGGTGCATCCATTG 0.287   
 TGLA131 ATGTTGTCAGAAATGGAAGA GATCAATGGATAAAGAAGAT 0.223   
 TGLA132 CCTTGGTTTCTAATTGTTTATTGCT ACATGACTTAGCAACTGAACAACAA 0.191   
 TGLA357 AAAAGGTTTGGGGTGTATGGG TCTCCCTCTGTCTCATCTAAG 0.319   
F1 UWCA28 CACAACCAAGGTCTGGCACAA GCACCACCATTCACAGGCA 0.234   
F2 UWCA5 CTTCCCTGTGTTAGGCTATGT CAAGAGAAGACAAGACTACAGA 0.191   
Markers below are Not included in the map
 6369 available on request   0.16   
  • Back to the chromosome panel
  • Data from http://www.projects.roslin.ac.uk/comrad/introduction.html
  • Contact: Dr John Williams
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