GO Terms Classification Count Results

ID: Porcine Annotated Oligonucleotide Microarray (Pigoligoarray) on Nov 6, 2008 (Thu, 01:30:26 PM, CST):

Counts:

Below is the mapping of your 86340 GO terms to 124 of the "GO_slim2" ancestor terms. Refer to FAQ for hints on possible interpretation of the results and/or to further improve your analysis.

GO Class IDDefinitionsCountsFractions
GO:0005488 binding 1924111.01%
GO:0005623 cell 1911110.94%
GO:0008152 metabolism 117936.75%
GO:0005622 intracellular 106366.09%
GO:0003824 catalytic activity 101875.83%
GO:0005515 protein binding 57443.29%
GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolism 51152.93%
GO:0005737 cytoplasm 45112.58%
GO:0005634 nucleus 39772.28%
GO:0007154 cell communication 37462.14%
GO:0016787 hydrolase activity 36272.08%
GO:0016740 transferase activity 36002.06%
GO:0019538 protein metabolism 35242.02%
GO:0000166 nucleotide binding 34731.99%
GO:0007165 signal transduction 32741.87%
GO:0006810 transport 32661.87%
GO:0003676 nucleic acid binding 32481.86%
GO:0006350 transcription 31311.79%
GO:0016043 cell organization and biogenesis 28231.62%
GO:0004871 signal transducer activity 22241.27%
GO:0003677 DNA binding 18371.05%
GO:0004872 receptor activity 17951.03%
GO:0005215 transporter activity 17831.02%
GO:0007275 development 17521.00%
GO:0005886 plasma membrane 16320.93%
GO:0006464 protein modification 15930.91%
GO:0009058 biosynthesis 15890.91%
GO:0030528 transcription regulator activity 13890.79%
GO:0030154 cell differentiation 13100.75%
GO:0005576 extracellular region 12690.73%
GO:0016301 kinase activity 12200.70%
GO:0007049 cell cycle 11820.68%
GO:0006996 organelle organization and biogenesis 11480.66%
GO:0005856 cytoskeleton 10990.63%
GO:0006811 ion transport 10120.58%
GO:0006259 DNA metabolism 9940.57%
GO:0008233 peptidase activity 9700.56%
GO:0006629 lipid metabolism 9330.53%
GO:0005739 mitochondrion 9230.53%
GO:0006950 response to stress 8820.50%
GO:0004672 protein kinase activity 8040.46%
GO:0030234 enzyme regulator activity 8000.46%
GO:0005509 calcium ion binding 7780.45%
GO:0016265 death 7170.41%
GO:0008219 cell death 7170.41%
GO:0003700 transcription factor activity 7070.40%
GO:0005198 structural molecule activity 6970.40%
GO:0015031 protein transport 6770.39%
GO:0005102 receptor binding 6620.38%
GO:0009653 morphogenesis 6600.38%
GO:0005975 carbohydrate metabolism 6400.37%
GO:0009056 catabolism 6240.36%
GO:0006091 generation of precursor metabolites and energy 6220.36%
GO:0005794 Golgi apparatus 6220.36%
GO:0005783 endoplasmic reticulum 6200.35%
GO:0003723 RNA binding 6150.35%
GO:0005615 extracellular space 6110.35%
GO:0006412 protein biosynthesis 5670.32%
GO:0008283 cell proliferation 5310.30%
GO:0009605 response to external stimulus 5120.29%
GO:0007010 cytoskeleton organization and biogenesis 4910.28%
GO:0007267 cell-cell signaling 4310.25%
GO:0006118 electron transport 4180.24%
GO:0008092 cytoskeletal protein binding 3920.22%
GO:0005216 ion channel activity 3870.22%
GO:0006519 amino acid and derivative metabolism 3810.22%
GO:0005694 chromosome 3650.21%
GO:0005829 cytosol 3350.19%
GO:0009719 response to endogenous stimulus 3280.19%
GO:0005578 extracellular matrix (sensu Metazoa) 3110.18%
GO:0000003 reproduction 3100.18%
GO:0005654 nucleoplasm 3000.17%
GO:0008289 lipid binding 2800.16%
GO:0005840 ribosome 2790.16%
GO:0003779 actin binding 2530.14%
GO:0030246 carbohydrate binding 2350.13%
GO:0004518 nuclease activity 2130.12%
GO:0016023 cytoplasmic membrane-bound vesicle 1930.11%
GO:0004721 phosphoprotein phosphatase activity 1900.11%
GO:0005489 electron transporter activity 1890.11%
GO:0040007 growth 1860.11%
GO:0007610 behavior 1740.10%
GO:0003774 motor activity 1730.10%
GO:0009607 response to biotic stimulus 1660.10%
GO:0019725 cell homeostasis 1610.09%
GO:0005773 vacuole 1430.08%
GO:0045182 translation regulator activity 1410.08%
GO:0016049 cell growth 1370.08%
GO:0008135 translation factor activity, nucleic acid binding 1280.07%
GO:0005764 lysosome 1230.07%
GO:0009790 embryonic development 1210.07%
GO:0005730 nucleolus 1200.07%
GO:0005635 nuclear membrane 1030.06%
GO:0005777 peroxisome 930.05%
GO:0005768 endosome 910.05%
GO:0005815 microtubule organizing center 880.05%
GO:0000228 nuclear chromosome 680.04%
GO:0003682 chromatin binding 650.04%
GO:0009628 response to abiotic stimulus 590.03%
GO:0040029 regulation of gene expression, epigenetic 570.03%
GO:0016209 antioxidant activity 460.03%
GO:0016032 viral life cycle 460.03%
GO:0019748 secondary metabolism 440.03%
GO:0007005 mitochondrion organization and biogenesis 280.02%
GO:0019825 oxygen binding 240.01%
GO:0005941 unlocalized protein complex 230.01%
GO:0005326 neurotransmitter transporter activity 170.01%
GO:0008037 cell recognition 150.01%
GO:0030312 external encapsulating structure 120.01%
GO:0007028 cytoplasm organization and biogenesis 120.01%
GO:0030313 cell envelope 100.01%
GO:0030188 chaperone regulator activity 90.01%
GO:0005929 cilium 60.00%
GO:0045735 nutrient reservoir activity 50.00%
GO:0005811 lipid particle 50.00%
GO:0009536 plastid 40.00%
GO:0005618 cell wall 20.00%
GO:0000229 cytoplasmic chromosome 10.00%
Total174733100.00%

Counted Terms

4580 unique terms from your data set are found belonging to at least one of the 118 "GO_slim2" classes

GO:0000002(3), GO:0000010(4), GO:0000012(20), GO:0006540(4), GO:0006541(28), GO:0006542(3), GO:0006543(3), GO:0006544(4), GO:0006545(3), GO:0006546(21), GO:0006547(6), GO:0006548(24), GO:0006552(3), GO:0006554(6), GO:0006555(4), GO:0006556(3), GO:0006559(30), GO:0006561(27), GO:0006562(15), GO:0006563(10), GO:0006564(33), GO:0006565(3), GO:0006568(4), GO:0006569(9), GO:0006570(2), GO:0006572(15), GO:0006573(4), GO:0006575(2), GO:0006583(16), GO:0006584(16), GO:0006585(5), GO:0006590(10), GO:0006591(4), GO:0006595(2), GO:0006596(15), GO:0006597(3), GO:0006601(6), GO:0006605(204), GO:0006606(27), GO:0006607(39), GO:0006608(6), GO:0006610(6), GO:0006611(18), GO:0006612(24), GO:0006613(24), GO:0006614(18), GO:0006621(6), GO:0000014(3), GO:0000015(20), GO:0000016(2), GO:0000018(15), GO:0000019(3), GO:0000022(12), GO:0000026(2), GO:0000028(3), GO:0000030(8), GO:0051264(4), GO:0051265(4), GO:0051267(2), GO:0051276(28), GO:0051281(1), GO:0051287(35), GO:0051289(9), GO:0051290(3), GO:0051291(6), GO:0051298(6), GO:0051318(1),
NOTE:
1. The number in the parenthesis postfixing a GO term indicates the frequency of this term in your data set.
2. Download all 4580 unique terms that are matched.

Odd Terms

44 odd terms in your data set do not belong to any classes of "GO_slim2"

GO:0000004(767), GO:0001620(1), GO:0001645(1), GO:0001747(6), GO:0004684(1), GO:0004685(11), GO:0004840(28), GO:0005554(879), GO:0005659(1), GO:0005660(4), GO:0006445(38), GO:0006938(1), GO:0006961(1), GO:0007046(17), GO:0007222(15), GO:0007582(15), GO:0008372(799), GO:0008640(2), GO:0008642(6), GO:0009596(5), GO:0009613(23), GO:0009618(14), GO:0009621(1), GO:0016066(6), GO:0016478(1), GO:0016526(14), GO:0019733(4), GO:0019734(2), GO:0019735(61), GO:0030106(26), GO:0030236(6), GO:0030333(3), GO:0030376(5), GO:0042055(3), GO:0042591(1), GO:0042828(1), GO:0042829(7), GO:0045012(18), GO:0045946(3), GO:0048004(6), GO:0050791(1), GO:0050874(1), GO:0050875(5), GO:0051227(4),
[ NOTE: The number in the parenthesis postfixing a GO term indicates the frequency of this term in your data set. ]


You are welcome to cite the use of this tool:
Zhi-Liang Hu, Jie Bao and James M. Reecy (2008) "CateGOrizer: A Web-Based Program to Batch Analyze Gene Ontology Classification Categories". Online Journal of Bioinformatics. 9 (2):108-112.


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