| Framework markers | Marker ID | Primer 1 | Primer 2 | Retention Frequency | Gene Names |
|---|---|---|---|---|---|
| F3 | ACADM* | GAGCAGGCTCTGATGTAG | CTCCATTGGTTATCCAC | 0.223 | acyl-coenzyme A dehydrogenase |
| BL41 | CCTCTGCCATCTTTATTCCG | AAGATCAACTTATTCCTCACAGTGG | 0.16 | ||
| BM220 | TTTTCTACTGCCCAACAAAGTG | TAGGTACCATAGCCTAGCCAAG | 0.17 | ||
| BM2924 | GATGGAGGCTGGAGAAATTG | TCTAATGGGTGGGACTCCG | 0.191 | ||
| BM3020 | TATATAAAAGGCCCTGATTCCA | GATCTGGAGCAGTCTGGCTA | 0.181 | ||
| F3 | BM4129 | AACCTTTATTAGGGGAGTTCGG | TAAGCTGTGGAGTGCAGCAA | 0.16 | |
| F2 | BM723 | ACCCTTGGTTTTCTGCTGG | CATCCTGTGTGAGTGTTGTGG | 0.117 | |
| BMC4214 | CTAGATTGTTTTCTATGAACAGGGG | GCATTTCCAGACCTTTCCTG | 0.266 | ||
| F4 | BMC5227 | TGTGCGCTGTACAGTGAGTG | ATGTCAAGGTCAGGGAGGAA | 0.213 | |
| BMS2075 | TCCCATTCCTGAGCTGATG | AGTCATTTCCCCTCTTTGGG | 0.16 | ||
| BMS2095 | TAACATTCCCAAGATGGTTGTG | TCAAGTTTTGCACATTGTATGC | 0.17 | ||
| BMS2145 | GCAAATAACCTCCATATTGCTG | ATGGAAGTGGCTTAAGTGTCC | 0.17 | ||
| F1 | BMS2522 | AGGCAGGTGTTTTGGTTCTG | AGGCCATGTAGAGGTAAAGTGC | 0.245 | |
| F4 | BMS2712 | GGTGCACTTGTTTCAACCAC | CCAGGAATATTTGGTCACCG | 0.266 | |
| BMS2891 | ATCTTGTTGAAATGCTCTGAGG | GCTTTCTCTACCATAAAGCGTG | 0.128 | ||
| BMS2904 | TGGCAGTGAGAGAGGGGAC | TCCACTTGAGAGCGTGTCTG | 0.213 | ||
| F3 | BMS694 | AAACTCTAGGTCCATCCAGGTT | AGATGTGGAAGTGTCCATCAA | 0.181 | |
| BMS819 | AAAGAATTGGACCTGACTGAGC | GCTTTCACTTCTGCTGGCTT | 0.245 | ||
| F3 | BMS835 | TCATGTGCATGGGGTTTG | ATCTGCCTACCTGGGCATC | 0.085 | |
| BMS871 | GAACATGAGGTTGACAAAGGA | TCCAGTGACTCTTTTCTGCC | 0.277 | ||
| F2 | CSSM054 | AAACACATGGAGAATCAGACCTCC | TTCCAACAACCGTAGCACCTCCTG | 0.215 | |
| CYM* | CCAGGGCTTCTGTACCAGTGGCTTC | TGAGAATCATCTGTCTGGAAACCTC | 0.16 | prochymosin | |
| HUJ246 | ACTCCAGTTTTCTTTCCTGGG | TGCCATGTAGTAGCTGTGTGC | 0.16 | ||
| HUJII77 | TCCATCAAGTATTTGAGTGCAA | ATAGCCCTACCCACTGTTTCTG | 0.223 | ||
| IDVGA53 | ACGGGACGCCTCGGTCAGTG | GAAGGGGAAGGGGAAGATGAAC | 0.223 | ||
| F3 | ILSTS029 | TGTTTTGATGGAACACAGCC | TGGATTTAGACCAGGGTTGG | 0.117 | |
| ILSTS044 | AGTCACCCAAAAGTAACTGG | ACATGTTGTATTCCAAGTGC | 0.138 | ||
| ILSTS064 | TTGGGTTGCCAAATTGCTCC | CTAGAGGATCTATCCACAGC | 0.117 | ||
| ILSTS096 | GTGACCTGGAGAAGTTTTCC | ACCACGCTCTGACTTGTAGC | 0.277 | ||
| F3 | INRA003 | CTGGAGGTGTGTGAGCCCCATTTA | CTAAGAGTCGAAGGTGTGACTAGG | 0.17 | |
| INRA200 | GACTGAGCGACTGAACTGAGG | TCTTCAGCTGCAAAGTAGAG | 0.106 | ||
| MCM58 | CTGGGTCTGTATAAGCACGTCTCC | CAGAACAATAAACGCTAAACCAGAGC | 0.17 | ||
| F2 | RM003 | ACTGACATTTTTGTGAGACTC | AAATTAGAAAATGCAGTGCC | 0.138 | |
| F1 | RM019 | CCAGGGTGCTGATATCTGGAGG | TTCAATGAACAAGATGGAGACTT | 0.245 | |
| F1 | RM065 | CTTTGTAACTAACTCTACTGCAG | TCTGACTCCCCCTCCCTGCAAG | 0.234 | |
| F4 | RM309 | TGCTACTCGCACACAGTGG | ACCTGAAGCAGGGAAGGG | 0.223 | |
| Markers below are Not included in the map | |||||
| BL1048 | ACCGCCACAAGGGAAATC | AAGGCAACAGCATATGAAACTG | 0.191 | ||
| BMS2790 | AAGACAAGGACTTTCAGCCC | AAAGAGTCGGACATTACTGAGC | 0.234 | ||
| BMS2833 | ACCAGATGACCAGACCTTGTG | TGATCTGTGGATCCTCCCTC | 0.223 | ||
| BR4502 | AGCCCACTCCAATATTCTTGC | AGAATCTCGGCAGGCTTTTC | 0.213 | ||