| QTL Map Information |
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| Chromosome: | 22 |
| QTL Peak Location: | 18.06 (cM) |
| QTL Span: | 18.06-18.06 (cM)
12.1-12.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs137206657 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 3.11E-7 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SCN5A (sodium voltage-gated channel alpha subunit 5) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | Animals were Chinese Holstein cattle. |
| Breeds associated:
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| Design: | Cows were genotyped using a GeneSeek 26K SNP chip, with data imputed to the BovineSNP50 chip, and analyzed for serum electrolyte traits. A total of 47,396 SNPs were used for analysis. |
| Analysis: | A linear mixed model was used. |
| Software: | Beagle, PLINK, FarmCPU |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Gan Q F, Li Y R, Lund M, Su G S, Liang X W |
| Affiliation: | College of Animal Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China |
| Title: | Genome-wide association study identifies loci linked to serum electrolyte traits in Chinese Holstein cattle |
| Journal: | Animal genetics, 2019, 50(6):744-748 |
| Links: |
PubMed | Abstract | List all data
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