| QTL Map Information |
|---|
| Chromosome: | 26 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
26.5-26.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs268244340 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | - |
| Threshold significance level: | Significant |
 |
P_values | 6.90E-8 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SORCS3 (sortilin related VPS10 domain containing receptor 3) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Youzhou dark goats. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina GoatSNP54 BeadChip, and GWAS were performed for litter size and coat/skin color traits. A total of 41,180 SNPs were used for analysis. |
| Analysis: | A linear model was used. |
| Software: | PLINK 1.07, ADMIXTURE 1.3, ggplot2 in R, Beagle v3.3.2 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Sun X, Niu Q, Jiang J, Wang G, Zhou P, Li J, Chen C, Liu L, Xu L, Ren H |
| Affiliation: | Chongqing Academy of Animal Sciences, Rongchang 402460, China |
| Title: | Identifying Candidate Genes for Litter Size and Three Morphological Traits in Youzhou Dark Goats Based on Genome-Wide SNP Markers |
| Journal: | Genes, 2023, 14(6):1183 |
| Links: |
PubMed | Abstract | List all data
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