| QTL Map Information |
|---|
| Chromosome: | 10 |
| QTL Peak Location: | 75.35 (cM) |
| QTL Span: | 74.98-75.72 (cM)
12.9-13.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | CNV |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.0003 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Friesian horses. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Affymetrix Axiom Equine Genotyping Array and analyzed for insect bite hypersensitivity. A total of 307,075 SNPs were used for analysis. |
| Analysis: | A CNV-based case-control association analysis and a SNP-based GWAS were performed. |
| Software: | PLINK, PennCNV, BEDTools, CNVRuler |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Schurink A, da Silva VH, Velie BD, Dibbits BW, Crooijmans RPMA, FranÒ«ois L, Janssens S, Stinckens A, Blott S, Buys N, Lindgren G, Ducro BJ |
| Affiliation: | Animal Breeding and Genomics, Wageningen University & Research, P.O. Box 338, 6700, AH, Wageningen, the Netherlands |
| Title: | Copy number variations in Friesian horses and genetic risk factors for insect bite hypersensitivity |
| Journal: | BMC genetics, 2018, 19(1): 49 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | Affx-101500978-Affx-102245259 |
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