| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 50.00 (cM) |
| QTL Span: | 166-173 (cM)
49.1-51.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.001 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | A cross was made between two meat-type lines divergently selected for fatness. |
| Breeds associated:
n/a
|
| Design: | Birds were genotyped for markers on chromosomes 1, 3, 5, and 7. Three approaches, including transcriptome profiling and eQTL mapping, were used to refine a QTL region on chromosome 5. |
| Analysis: | An interval mapping method was used to detect QTL. Multivariate QTL analysis was also performed. |
| Software: | CRIMAP, QTLMAP |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Le Mignon, G; Désert, C; Pitel, F; Leroux, S; Demeure, O; Guernec, G; Abasht, B; Douaire, M; Le Roy, P; Lagarrigue, S |
| Affiliation: | INRA, UMR598, Genetique Animale, IFR140 GFAS, F-35000 Rennes, France; sandrine.lagarrigue@agrocampus-ouest.fr |
| Title: | Using transcriptome profiling to characterize QTL regions on chicken chromosome 5. |
| Journal: | BMC genomics, 2009, 10: 575 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Refinement of QTL position identified in PMID 16451793 |
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