Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 11796 Description:

 Trait Information
Trait name: Shank length Vertebrate Trait Ontology: Tarsometatarsus length
Reported name: Shank length Product Trait Ontology: n/a
Symbol: SHKLN Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:7
QTL Peak Location:50.00 (cM)
QTL Span:140-165 (cM)
31.2-36.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":ADL0315
Peak:
Lower, "Significant":ADL0169
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
F_Stat6.25
VARIANCE3.92
P_values<0.01
Dominance effect:0.26
Additive effect:-0.23
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #11796
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Birds were from a reciprocal cross between Silky Fowl and White Plymouth Rock.
     Breeds associated:
    Design:Birds were genotyped for 129 microsatellite markers and analyzed for shank length and growth.
    Analysis:A least-squares method was employed for QTL mapping.
    Software:CRIMAP, QTL Express
    Notes: 
    Links:Edit

     Reference
    Authors:Gao, Y; Du, Z-Q; Feng, C-G; Deng, X-M; Li, N; Da, Y; Hu, X-X
    Affiliation:State Key Laboratory for Agrobiotechnology, China Agricultural University, Beijing, China; huxx@cau.edu.cn
    Title:Identification of quantitative trait loci for shank length and growth at different development stages in chicken.
    Journal:Animal genetics, 2010, 41(1): 101-4
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:12 weeks of age
    User inputs on reference #19917046
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL11796 was published in 2010, and was curated into QTLdb on 2010-06-11. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:11796

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team