| QTL Map Information |
|---|
| Chromosome: | 28 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
2.0-2.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs316038837 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were from an F2 resource population obtained from a cross between White Leghorn and Dongxiang Blue-shelled chickens. |
| Breeds associated:
n/a
|
| Design: | Birds were genotyped using the Affymetrix Axiom Chicken Genotyping Array and analyzed for ovarian follicle number. A total of 59,286 SNPs were used for analysis. |
| Analysis: | Genome-wide efficient mixed-model association (GEMMA) and Bayesian methods were used. |
| Software: | JMP, ASReml, BEAGLE, PLINK, GenSel, GenABEL, Haploview, GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Shen M, Sun H, Qu L, Ma M, Dou T, Lu J, Guo J, Hu Y, Wang X, Li Y, Wang K, Yang N |
| Affiliation: | National Engineering Laboratory for Animal Breeding and MOA Key Laboratory of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University, Beijing, China |
| Title: | Genetic Architecture and Candidate Genes Identified for Follicle Number in Chicken |
| Journal: | Scientific reports, 2017, 7(1): 16412 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | GEMMA |
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