| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
166.5-166.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs13968203 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.66E-05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were from an F2 resource population generated from reciprocal crosses between White Leghorn and Dongxiang Blue-Shelled chickens. |
| Breeds associated:
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| Design: | Birds were genotyped using the Affymetrix Axiom 600K Chicken Genotyping Array and analyzed for contour feather density. A total of 435,867 SNPs were used for analysis. |
| Analysis: | A linear mixed model was used. |
| Software: | PLINK, Beagle, JMP, ASReml, GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Sun H, Hu Y, Dou T, Qu L, Ma M, Lu J, Wang X, Shen M, Wang K |
| Affiliation: | Jiangsu Institute of Poultry Science, Chinese Academy of Agricultural Science, Yangzhou, China |
| Title: | Genetic architecture related to contour feathers density in an F2 resource population via a genome-wide association study |
| Journal: | 3 Biotech, 2019, 9(11): 400 |
| Links: |
PubMed | Abstract | List all data
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