Release 56
(Apr 24, 2025)

QTL 258634 Description:

 Trait Information
Trait name: Egg number Vertebrate Trait Ontology: Egg quantity
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: EN Clinical Measurement Ontology: Egg number, fowl
 QTL Map Information
Chromosome:10
QTL Peak Location:n/a
QTL Span:n/a
19.2-19.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs10721736
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:Comparison-wise
Threshold significance level:Significant
P_values4.52E-5
Dominance effect:n/a
Additive effect:n/a
Associated Gene:CALML4 (calmodulin like 4)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Meat-type chickens were obtained from seven lines of two breeding companies in China.
     Breeds associated:
    n/a
    Design:Birds were genotyped using a custom 55K SNP chicken array, and GWAS was performed for egg number. A total of 37,847-45,346 SNPs were used for analysis.
    Analysis:GWAS was performed using a univariate linear mixed model.
    Software:GEMMA 0.98.1. PLINK, R software, Metal, SNPTEST v2.5.6
    Notes: 
    Links:Edit

     Reference
    Authors:Ding J, Ying F, Li Q, Zhang G, Zhang J, Liu R, Zheng M, Wen J, Zhao G
    Affiliation:Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
    Title:A significant quantitative trait locus on chromosome Z and its impact on egg production traits in seven maternal lines of meat-type chicken
    Journal:Journal of animal science and biotechnology, 2022, 13(1): 96
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:line W4
    User inputs on reference #35941697
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  • Cite this Data:

    Animal QTLdb: QTL258634 was published in 2022, and was curated into QTLdb on 2022-08-29. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:258634

     

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