| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
82.5-82.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs314037625 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.011 | | P_values | 3.23E-06 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #285068
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Birds were from a Gushi-Anka chicken F2 resource population. |
| Breeds associated:
n/a
|
| Design: | Chickens were genotyped using the Illumina HiSeq X Ten platform, and GWAS were performed for fatty acid composition traits. A total of 323,306 SNPs were used for analysis. |
| Analysis: | A mixed linear model was used for GWAS. |
| Software: | VCFtools, TASSEL, GCTA, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Fan S, Yuan P, Li S, Li H, Zhai B, Li Y, Zhang H, Gu J, Li H, Tian Y, Kang X, Zhang Y, Li G |
| Affiliation: | College of Animal Science and Technology, Henan Agricultural University, No.15 Longzihu University Area, Zhengzhou New District, Zhengzhou, 450002, China. |
| Title: | Genetic architecture and key regulatory genes of fatty acid composition in Gushi chicken breast muscle determined by GWAS and WGCNA. |
| Journal: | BMC Genomics, 2023, 24(1): 434 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #37537524
Add your comments
Note similar findings
Note contradictions
|
