| QTL Map Information |
|---|
| Chromosome: | 10 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
2.0-2.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs794410298 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | NEO1 (neogenin 1) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #286866
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Birds were Shuanglian chickens. |
| Breeds associated:
n/a
|
| Design: | Birds were subjected to whole-genome sequencing, and GWAS were performed for egg production traits. A total of 11,006,178 SNPs were used for anlaysis. |
| Analysis: | A mixed linear model was used. |
| Software: | GATK 4.1.8.1, Beagle v5.0, PLINK 1.90, GEMMA 0.98.3 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Fu M, Wu Y, Shen J, Pan A, Zhang H, Sun J, Liang Z, Huang T, Du J, Pi J |
| Affiliation: | Institute of Animal Husbandry and Veterinary, Hubei Academy of Agricultural Science, Wuhan 430064, China |
| Title: | Genome-Wide Association Study of Egg Production Traits in Shuanglian Chickens Using Whole Genome Sequencing |
| Journal: | Genes, 2023, 14(12):2129 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #38136951
Add your comments
Note similar findings
Note contradictions
|
