| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
67.4-67.4 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs739324879 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.04 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SERPINB6 (serpin peptidase inhibitor, clade B (ovalbumin), member 6) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were female Tiannong partridge chickens. |
| Breeds associated:
n/a
|
| Design: | Chickens were subjected to whole-genome sequencing, and an eGWAS was performed using 11,766,230 SNPs. In addition, SNPs in the SERPINB6 gene were analyzed for association with carcass traits. |
| Analysis: | The general linear model and mixed linear models were used. |
| Software: | PLINK v1.9, SAMtools v1.12, PICSRD v2.26, GATK v4.2.2, GEMMA v0.98.4, SPSS 26.0 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhao D, Liu R, Tan X, Kang H, Wang J, Ma Z, Zhao H, Xiang H, Zhang Z, Li H, Zhao G |
| Affiliation: | Guangdong Provincial Key Laboratory of Animal Molecular Design and Precise Breeding, School of Life Science and Engineering, Foshan University, Foshan, China |
| Title: | Large-scale transcriptomic and genomic analyses reveal a novel functional gene SERPINB6 for chicken carcass traits |
| Journal: | Journal of animal science and biotechnology, 2024, 15(1):70 |
| Links: |
PubMed | Abstract | List all data
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