Release 56
(Apr 24, 2025)

QTL 56999 Description:

 Trait Information
Trait name: Head weight Vertebrate Trait Ontology: Head mass
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: HEADWT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:12
QTL Peak Location:0.00 (cM)
QTL Span:1540.49-1540.49 (cM)
10.6-10.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
P_values<0.01
Dominance effect:n/a
Additive effect:n/a
Associated Gene:KLF15 (Kruppel-like factor 15)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #56999
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Birds were from an F2 resource population of Gushi chickens crossed with Anka broilers.
     Breeds associated:
    n/a
    Design:Chickens were genotyped for a 2-bp indel mutation in KLF15 and analyzed for growth and carcass traits.
    Analysis:A linear mixed model was used.
    Software:SPSS
    Notes:Genome location determined as follows: Paper gives indel position as 13781-13782 in KLF15 gene. KLF15 (gene ID 427588) is at GGC12:10612530..10626926 on GG_4.0, per NCBI. Therefore, indel starts at 10612530+13781=10626311.
    Links:Edit

     Reference
    Authors:Lyu S J, Tian Y D, Wang S H, Han R L, Mei X X, Kang X T
    Affiliation:a College of Animal Science and Veterinary Medicine, Henan Innovative Engineering Research Center of Poultry Germplasm Resource , Henan Agricultural University , Zhengzhou , P. R. China.
    Title:A novel 2-bp indel within Krüppel-like factor 15 gene (KLF15) and its associations with chicken growth and carcass traits.
    Journal:British poultry science, 2014, 55(4): 427-34
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #25056727
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL56999 was published in 2014, and was curated into QTLdb on 2015-07-31. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:56999

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team