Release 56
(Apr 24, 2025)

QTL 13825 Description:

 Trait Information
Trait name: Fecal egg count Vertebrate Trait Ontology: Response to parasitic infection trait
Reported name: Fecal egg count Product Trait Ontology: n/a
Symbol: FECGEN Clinical Measurement Ontology: Fecal parasite egg count
 QTL Map Information
Chromosome:3
QTL Peak Location:199.1 (cM)
QTL Span:203.87-204.07 (cM)
152.5-152.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.0042
Dominance effect:n/a
Additive effect:n/a
Associated Gene:IFNG (interferon, gamma)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Soay sheep.
     Breeds associated:
    Design:Animals were genotyped for a polymorphism in gamma-interferon and two flanking microsatellites and analyzed for resistance to gastrointestinal nematodes.
    Analysis:Generalized linear models were used.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:Coltman, D W; Wilson, K; Pilkington, J G; Stear, M J; Pemberton, J M
    Affiliation:Institute of Cell, Animal and Population Biology, University of Edinburgh, Edinburgh EH9 3JT, UK
    Title:A microsatellite polymorphism in the gamma interferon gene is associated with resistance to gastrointestinal nematodes in a naturally-parasitized population of Soay sheep.
    Journal:Parasitology, 2001, 122 (Pt 5): 571-82
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:16 months of age
    User inputs on reference #11393831
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  • Cite this Data:

    Animal QTLdb: QTL13825 was published in 2001, and was curated into QTLdb on 2010-11-30. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:13825

     

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