Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 13889 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: fat depth at third lumbar vertebra Product Trait Ontology: n/a
Symbol: BFLUMB3 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:86 (cM)
QTL Span:88.66-88.86 (cM)
70.4-70.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:-
Analysis type:QTL
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #13889
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  •  QTL Experiment in Brief
    Animals:570 related sheep from the UK Charollais Sire Referencing Scheme.
     Breeds associated:
    Design:Phenotypic measurements: live weight at eight weeks, ultrasonic scanning at 20 weeks. Corrected for fixed effects. Genotyping: chromosomes 1-3, 18, 20 at a total of 69 markers at an average interval of 17cM. Marker order as per Maddox et al. 2001.
    Analysis:Chromosome-wide significance of QTL were determined by permutation testing.
    Software:CRIMAP, QTL Express
    Notes: 
    Links:Edit

     Reference
    Authors:AF McRae, SC Bishop, GA Walling, AD Wilson and RM Visscher
    Affiliation:Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, Edinburgh, UK; Roslin Institute (Edinburgh), Roslin, Midlothian EH25 9PS, UK
    Title:Mapping of multiple quantitative trait loci for growth and carcass traits in a complex commerical sheep pedigree
    Journal:Animal science (Cambridge Journals), 2005, 80:135-141
    Links:  No PubMed entry  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:corrected for live weight; variance component analysis
    User inputs on reference #ISU0053
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  • Cite this Data:

    Animal QTLdb: QTL13889 was published in 2005, and was curated into QTLdb on 2010-12-21. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:13889

     

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