| QTL Map Information |
|---|
| Chromosome: | 11 |
| QTL Peak Location: | 89.96 (cM) |
| QTL Span: | 89.96-89.96 (cM)
51.0-51.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs425348249 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.0460 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | RPTOR (regulatory associated protein of MTOR complex 1) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #140257
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Rasa Aragonesa sheep. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina OvineSNP50 Infinium BeadChip and analyzed for reproductive seasonality traits. |
| Analysis: | Association analyses were run using a permutation procedure accounting for population stratification. GWAS were performed under additive, dominant, recessive, and genotypic inheritance models. |
| Software: | PLINK, SNPEVG |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Martinez-Royo A, Alabart JL, Sarto P, Serrano M, Lahoz B, Folch J, Calvo JH |
| Affiliation: | Unidad de Producción y Sanidad Animal, Centro de Investigación y Tecnología Agroalimentaria de Aragón (CITA), Gobierno de Aragón, Av. Montañana 930, 50059 Zaragoza, Spain |
| Title: | Genome-wide association studies for reproductive seasonality traits in Rasa Aragonesa sheep breed |
| Journal: | Theriogenology, 2017, 99: 21-29 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | progesterone cycling months |
User inputs on reference #28708495
Add your comments
Note similar findings
Note contradictions
|
