Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 16016 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic Cell Score Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:10
QTL Peak Location:38.1 (cM)
QTL Span:25.9-41 (cM)
22.3-35.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":MNS64A
Peak:
Lower, "Significant":HH41
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
LOD_score2.2
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #16016
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were from crosses between Awassi and Merino sheep.
     Breeds associated:
    Design:Animals were genotyped for 189 microsatellite markers and analyzed for lactation persistency and extended lactation traits.
    Analysis:Two methods were used for QTL detection: a maximum likelihood procedure and regression analysis for a half-sib design.
    Software:R software, QTL Express
    Notes: 
    Links:Edit

     Reference
    Authors:Jonas E, Thomson PC, Hall EJ, McGill D, Lam MK, Raadsma HW.
    Affiliation:ReproGen-Animal Bioscience Group, Faculty of Veterinary Science, University of Sydney, 425 Werombi Road, Camden, NSW 2570, Australia
    Title:Mapping quantitative trait loci (QTL) in sheep. IV. Analysis of lactation persistency and extended lactation traits in sheep
    Journal:Genet Sel Evol, 2011, 43:22
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Extended lactation
    User inputs on reference #21693024
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL16016 was published in 2011, and was curated into QTLdb on 2012-02-24. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:16016

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team