Release 56
(Apr 24, 2025)

QTL 160558 Description:

 Trait Information
Trait name: Meat palmitoleic acid content Vertebrate Trait Ontology: n/a
Reported name: (n/a) Product Trait Ontology: Meat fatty acid cis-9-C16:1 content
Symbol: FA-C16:1 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:1
QTL Peak Location:218.96 (cM)
QTL Span:218.71-219.21 (cM)
185.2-185.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs427851840
Peak:
Lower, "Significant":rs400807575
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:n/a
Threshold significance level:Suggestive
VARIANCE0.38%
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were male Santa Inês sheep.
     Breeds associated:
    Design:Animals were genotyped using the Illumina OvineSNP50 BeadChip and analyzed for meat fatty acid composition. A total of 42,363 SNPs were used for analysis.
    Analysis:Bivariate models were used.
    Software:BLUPF90
    Notes: 
    Links:Edit

     Reference
    Authors:Rovadoscki G A, Pertile S F N, Alvarenga A B, Cesar A S M, Pértille F, Petrini J, Franzo V, Soares W V B, Morota G, Spangler M L, Pinto L F B, Carvalho G G P, Lanna D P D, Coutinho L L, Mourão G B
    Affiliation:Department of Animal Science, University of São Paulo (USP) / Luiz de Queiroz College of Agriculture (ESALQ), Av. Pádua Dias, 11, ESALQ/USP, Piracicaba, São Paulo, 13418-900, Brazil
    Title:Estimates of genomic heritability and genome-wide association study for fatty acids profile in Santa Inês sheep
    Journal:BMC genomics, 2018, 19(1): 375
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #29783944
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  • Cite this Data:

    Animal QTLdb: QTL160558 was published in 2018, and was curated into QTLdb on 2018-07-25. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:160558

     

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