| QTL Map Information |
|---|
| Chromosome: | 23 |
| QTL Peak Location: | 77.46 (cM) |
| QTL Span: | 77.46-77.46 (cM)
54.0-54.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs426180301 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.027345033 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | The experimental population consisted of 1,740 crossbred dairy sheep, from crosses of meat-type sheep to dairy-type East Friesian and Lacuane breed. |
| Breeds associated:
n/a
|
| Design: | Of the 1,740 animals, 226 had genotypes for 54,241 SNPs on the Illumina OvineSNP50 genotyping array. |
| Analysis: | Three statistical techniques, namely genome-wide association study (GWAS), ridge-regression BLUP and BayesCpi, were used to identify SNPs in significant association with three milk production traits. |
| Software: | BLUPF90, R codes |
| Notes: | |
| Reference |
|---|
| Authors: | Hao Li, Xiao-Lin Wu, Richard G. Tait Jr., Stewart Bauck, David L.Thomas, Thomas W. Murphy, Guilherme J.M. Rosa |
| Affiliation: | Department of Animal Sciences, University of Wisconsin, Madison, WI 53706 |
| Title: | Genome-wide association study of milk production traits in a crossbred dairy sheep population using three statistical models |
| Journal: | Animal Genetics, 2020, 51(4): 624-628 |
| Links: |
PubMed | Abstract | List all data
|
| Additional Information |
|---|
| Comments: | SNP_name=OAR23_57543161.1; |
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