Release 56
(Apr 24, 2025)

QTL 180121 Description:

 Trait Information
Trait name: Lumbar vertebra number Vertebrate Trait Ontology: Lumbar vertebra quantity
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: LVNUM Clinical Measurement Ontology: Lumbar vertebrae number
 QTL Map Information
Chromosome:3
QTL Peak Location:15.19 (cM)
QTL Span:15.19-15.19 (cM)
11.2-11.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs414302710
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.004
Dominance effect:n/a
Additive effect:n/a
Associated Gene:NR6A1 (nuclear receptor subfamily 6 group A member 1)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were adult Kazakh sheep.
     Breeds associated:
    n/a
    Design:Animals were genotyped for two SNPs in the NR6A1 gene and analyzed for lumbar vertebra number.
    Analysis:Chi-square tests were used.
    Software:SPSS
    Notes: 
    Links:Edit

     Reference
    Authors:Zhang X, Li C, Li X, Liu Z, Ni W, Cao Y, Yao Y, Islamov E, Wei J, Hou X, Hu S
    Affiliation:Animal Genetic Engineering Laboratory, College of Life Sciences, Shihezi University, Shihezi, 832003, Xinjiang, China
    Title:Association analysis of polymorphism in the NR6A1 gene with the lumbar vertebrae number traits in sheep
    Journal:Genes & genomics, 2019, 41(10): 1165-1171
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #31302865
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  • Cite this Data:

    Animal QTLdb: QTL180121 was published in 2019, and was curated into QTLdb on 2019-10-16. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:180121

     

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