| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | 174.85 (cM) |
| QTL Span: | 174.85-174.85 (cM)
129.6-129.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs159830154 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SIG of SEL |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | n/a |
 |
Fst | 0.6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SOCS2 (suppressor of cytokine signaling 2) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Katahdin, St. Croix, and Dorper sheep. |
| Breeds associated:
|
| Design: | Signatures of selection were identified between Haemonchus contortus-resistant and -susceptible sheep breeds. |
| Analysis: | Signatures of selection were identified using F(st) statistic at each SNP using frequentist and Bayesian approaches. |
| Software: | JMP |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Estrada-Reyes ZM, Tsukahara Y, Amadeu RR, Goetsch AL, Gipson TA, Sahlu T, Puchala R, Wang Z, Hart SP, Mateescu RG |
| Affiliation: | Department of Animal Sciences, University of Florida, Gainesville, FL, USA |
| Title: | Signatures of selection for resistance to Haemonchus contortus in sheep and goats |
| Journal: | BMC genomics, 2019, 20(1): 735 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | frequentist approach |
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