| QTL Map Information |
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| Chromosome: | 11 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
37.5-37.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs413316737 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | HOXB13 (homeobox B13) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | Animals were Merinolandschaf sheep. |
| Breeds associated:
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| Design: | SNP-based association analysis and haplotype-based mapping were performed for tail length. Animals were genotyped using the Illumina OvineSNP50 BeadChip, and a total of 45,114 SNPs were used for analysis. |
| Analysis: | Mixed linear model–based association analysis and combined linkage disequilibrium and linkage analysis were performed. |
| Software: | GCTA v1.93.2 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Lagler DK, Hannemann E, Eck K, Klawatsch J, Seichter D, Russ I, Mendel C, Lühken G, Krebs S, Blum H, Upadhyay M, Medugorac I |
| Affiliation: | Population Genomics Group, Department of Veterinary Sciences, LMU Munich, Lena-Christ-Str. 48, 82152, Martinsried, Germany |
| Title: | Fine-mapping and identification of candidate causal genes for tail length in the Merinolandschaf breed |
| Journal: | Communications biology, 2022, 5(1): 918 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
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| Comments: | This variant is in complete linkage disequilibrium with a SINE insertion in the HOXB13 promoter region |
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