Release 56
(Apr 24, 2025)

QTL 297168 Description:

 Trait Information
Trait name: Rump width Vertebrate Trait Ontology: Rump width
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: RUMPW Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:13
QTL Peak Location:n/a
QTL Span:n/a
62.9-62.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs193640220
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:-
Test base:-
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SNTA1 (syntrophin alpha 1)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Ujumqin sheep.
     Breeds associated:
    Design:Animals were genotyped for SNPs in three candidate genes and analyzed for SNP association with growth traits.
    Analysis:The general linear model was used.
    Software:SAMtools, GATK, Excel 2021, SPSS 22.0
    Notes: 
    Links:Edit

     Reference
    Authors:Liu Z, Qin Q, Zhang C, Xu X, Dai D, Lan M, Wang Y, Zhang J, Zhao D, Kong D, Qin T, Wu D, Gong X, Zhou X, Suhe A, Wang Z, Liu Z
    Affiliation:College of Animal Science, Inner Mongolia Agricultural University, Hohhot, China
    Title:Effects of nonsynonymous single nucleotide polymorphisms of the KIAA1217, SNTA1 and LTBP1 genes on the growth traits of Ujumqin sheep
    Journal:Frontiers in Veterinary Science, 2024, 11: 1382897
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #38756519
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  • Cite this Data:

    Animal QTLdb: QTL297168 was published in 2024, and was curated into QTLdb on 2024-06-18. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:297168

     

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