| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
140.3-140.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs419988472 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | DHRS9 (dehydrogenase/reductase 9) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Morada Nova sheep. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina OvineSNP50v3 BeadChip and GWAS was performed for eggs per gram of feces. A total of 45,070 SNPs were used for analysis. |
| Analysis: | A snpBLUP GWAS was performed to identify significant SNPs at FDR <0.05. |
| Software: | GATK v4.2.0.0, snpQC, NAM in R, MatrixEQTL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Niciura SCM, Cardoso TF, Ibelli AMG, Okino CH, Andrade BG, Benavides MV, Chagas ACS, Esteves SN, Minho AP, Regitano LCA, Gondro C |
| Affiliation: | Embrapa Pecuária Sudeste, São Carlos, SP, Brazil |
| Title: | Multi-omics data elucidate parasite-host-microbiota interactions and resistance to Haemonchus contortus in sheep |
| Journal: | Parasites & vectors, 2024, 17(1): 102 |
| Links: |
PubMed | Abstract | List all data
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