Release 56
(Apr 24, 2025)

QTL 106200 Description:

 Trait Information
Trait name: Palmitoleic acid content Vertebrate Trait Ontology: n/a
Reported name: (n/a) Product Trait Ontology: Meat fatty acid cis-9-C16:1 content
Symbol: FA-C16:1 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:12
QTL Peak Location:96.00 (cM)
QTL Span:96.00-96.00 (cM)
44.4-44.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs789173062
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.0400
Dominance effect:n/a
Additive effect:n/a
Associated Gene:LOC100511657 (serine/threonine-protein kinase NLK)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were from a commercial crossbred of Duroc and Large White x Landrace pigs.
     Breeds associated:
    Design:Animals were genotyped for seven polymorphisms in NLK and analyzed for intramuscular fat and fatty acid composition traits.
    Analysis:A general linear model was used.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:Supakankul P, Mekchay S
    Affiliation:Department of Animal and Aquatic Sciences, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand
    Title:Association of NLK polymorphisms with intramuscular fat content and fatty acid composition traits in pigs
    Journal:Meat science, 2016, 118: 61-5
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #27050409
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  • Cite this Data:

    Animal QTLdb: QTL106200 was published in 2016, and was curated into QTLdb on 2016-07-29. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:106200

     

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