| QTL Map Information |
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| Chromosome: | 8 |
| QTL Peak Location: | 39.57 (cM) |
| QTL Span: | 39.33-39.81 (cM)
41.3-41.8 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs81228710 |
| Peak: | |
| Lower, "Significant": | rs81244630 |
| Lower, "Suggestive": | n/a |
| Marker type: | CNV |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.17E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | KIT (v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
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| Animals: | Animals were White Duroc x Chinese Erhualian pigs. |
| Breeds associated:
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| Design: | Animals were gentoyped using the PorcineSNP60 BeadChip in order to identify CNV regions. Copy number variable genes were identified as candidate genes for a variety of growth, carcass, and physiological traits. |
| Analysis: | Association of one CNV with MCH and MCV was analyzed using a mixed linear model. |
| Software: | R software |
| Notes: | |
| Links: | Edit |
| Reference |
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| Authors: | Chen C, Qiao R, Wei R, Guo Y, Ai H, Ma J, Ren J, Huang L |
| Affiliation: | Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, Nanchang, 330045, China |
| Title: | A comprehensive survey of copy number variation in 18 diverse pig populations and identification of candidate copy number variable genes associated with complex traits |
| Journal: | BMC genomics, 2012, 13: 733 |
| Links: |
PubMed | Abstract | List all data
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