Release 56
(Apr 24, 2025)

QTL 122477 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: backfat thickness Product Trait Ontology: n/a
Symbol: 10RIBBFT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:101.15 (cM)
QTL Span:101.15-101.15 (cM)
123.4-123.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs81216713
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:-
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:HSD17B4 (hydroxysteroid 17-beta dehydrogenase 4)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Berkshire, Duroc, Landrace, and Yorkshire pigs.
     Breeds associated:
    Design:Animals were genotyped for one SNP in the HSD17B4 gene and analyzed for carcass and meat quality traits.
    Analysis:The general linear model procedure was used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Jo J L, Hwang J H, Kwon S G, Park D H, Kim T W, Kang D G, Yu G E, Kim I S, Ha J G, Kim C W
    Affiliation:Swine Science and Technology Center, Gyeongnam National University of Science & Technology, Jinju, South Korea
    Title:Association between a non-synonymous HSD17B4 single nucleotide polymorphism and meat-quality traits in Berkshire pigs
    Journal:Genetics and molecular research : GMR, 2016, 15(4)
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #27819726
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  • Cite this Data:

    Animal QTLdb: QTL122477 was published in 2016, and was curated into QTLdb on 2016-12-16. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:122477

     

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