| QTL Map Information |
|---|
| Chromosome: | 15 |
| QTL Peak Location: | 106.45 (cM) |
| QTL Span: | 106.45-106.45 (cM)
119.1-119.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80967596 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duroc, Landrace, Yorkshire, and Landrace x Yorkshire pigs. |
| Breeds associated:
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| Design: | Animals were gnenotyped using the Illumina PorcineSNP60 v2 BeadChip and analyzed for SNP association with piglet splay leg syndrome. A total of 43,495 SNPs were used for analysis. |
| Analysis: | GWAS was performed by applying principal component analysis. |
| Software: | PLINK, GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Hao X, Plastow G, Zhang C, Xu S, Hu Z, Yang T, Wang K, Yang H, Yin X, Liu S, Wang Z, Wang Z, Zhang S |
| Affiliation: | Key Lab of Breeding and Reproduction of Ministry of Education, Huazhong Agricultural University, Wuhan, Hubei, 430070, China |
| Title: | Genome-wide association study identifies candidate genes for piglet splay leg syndrome in different populations |
| Journal: | BMC genetics, 2017, 18(1): 64 |
| Links: |
PubMed | Abstract | List all data
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