| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 5.26 (cM) |
| QTL Span: | 5.26-5.26 (cM)
4.9-4.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81289055 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
Bayes_value | >100 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CDH13 (cadherin 13) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Pigs were from two dam lines: a Landrace-based line and a Large White-based line. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for teat number. A total of 37,412 (Landrace-based) or 37,782 (Large White-based) SNPs were used for analysis. |
| Analysis: | A Bayesian variable selection model was used. |
| Software: | Bayz, R package CODA, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Verardo L L, Lopes M S, Wijga S, Madsen O, Silva F F, Groenen M A M, Knol E F, Lopes P S, Guimarães S E F |
| Affiliation: | Department of Animal Science, Universidade Federal de Viçosa, Viçosa, 36570000, Brazil |
| Title: | After genome-wide association studies: Gene networks elucidating candidate genes divergences for number of teats across two pig populations |
| Journal: | Journal of animal science, 2017, 94(4): 1446-58 |
| Links: |
PubMed | Abstract | List all data
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