| QTL Map Information |
|---|
| Chromosome: | 14 |
| QTL Peak Location: | 80.40 (cM) |
| QTL Span: | 80.40-80.40 (cM)
113.5-113.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80889348 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | ACTR1A (ARP1 actin related protein 1 homolog A) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were purebred female Duroc pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for fatty acid composition. A total of 39,919 SNPs were used for analysis. |
| Analysis: | GWAS was conducted following genome-wide rapid association using a mixed model and regression-genomic control (GRAMMAR-GC) approach. |
| Software: | PLINK, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Viterbo VS, Lopez BIM, Kang H, Kim H, Song CW, Seo KS |
| Affiliation: | Department of Animal Science and Technology, Sunchon National University, Suncheon 57922, Korea |
| Title: | Genome wide association study of fatty acid composition in Duroc swine |
| Journal: | Asian-Australasian journal of animal sciences, 2018, 31(8): 1127-1133 |
| Links: |
PubMed | Abstract | List all data
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