Release 56
(Apr 24, 2025)

QTL 168857 Description:

 Trait Information
Trait name: Ear area Vertebrate Trait Ontology: Outer ear area
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: EAREA Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:5
QTL Peak Location:0.00 (cM)
QTL Span:0.00-0.00 (cM)
29.5-29.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs338733115
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:WIF1 (WNT inhibitory factor 1)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Large White x Minzhu or Beijing Black pigs.
     Breeds associated:
    Design:Animals were genotyped for SNPs in the WIF1 and HMGA2 genes and analyzed for association with ear size.
    Analysis:The general linear model procedure was used.
    Software:SAS, MTDFREML, TASSEL
    Notes: 
    Links:Edit

     Reference
    Authors:Liang J, Zhang Y, Wang L, Liu X, Yan H, Wang L, Zhang L
    Affiliation:State Key Laboratory of Animal Nutrition; Key Laboratory of Animal (Poultry) Genetics Breeding and Reproduction, Ministry of Agriculture; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100193, China
    Title:Molecular cloning of WIF1 and HMGA2 reveals ear-preferential expression while uncovering a missense mutation associated with porcine ear size in WIF1
    Journal:Animal genetics, 2019, 50(2):157-161
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Beijing Black
    User inputs on reference #30815903
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  • Cite this Data:

    Animal QTLdb: QTL168857 was published in 2019, and was curated into QTLdb on 2019-03-21. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:168857

     

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