| QTL Map Information |
|---|
| Chromosome: | 14 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
67.1-79.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80968726 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 3.83% | | P_values | 4.57E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Italian Large White pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip v.2 and analyzed for 30 hematological and clinical/biochemical traits. A total of 40,064 SNPs were used for analysis via three GWAS approaches (single-trait, multi-trait, and Bayesian). |
| Analysis: | Linear mixed models were used for single-marker, single-trait and multivariate GWAS. The Bayes-C method was used for windows-based analysis. |
| Software: | Beagle, GenSel, Haploview, GEMMA, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Bovo S, Mazzoni G, Bertolini F, Schiavo G, Galimberti G, Gallo M, Dall'Olio S, Fontanesi L |
| Affiliation: | Department of Agricultural and Food Sciences, Division of Animal Sciences, University of Bologna, Viale G. Fanin 46, 40127, Bologna, Italy |
| Title: | Genome-wide association studies for 30 haematological and blood clinical-biochemical traits in Large White pigs reveal genomic regions affecting intermediate phenotypes |
| Journal: | Scientific reports, 2019, 9(1): 7003 |
| Links: |
PubMed | Abstract | List all data
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