Release 56
(Apr 24, 2025)

QTL 172588 Description:

 Trait Information
Trait name: Cis-Vaccenic acid content Vertebrate Trait Ontology: n/a
Reported name: (n/a) Product Trait Ontology: Meat fatty acid cis-11-C18:1 content
Symbol: FA-C18:1N7 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:12
QTL Peak Location:0.00 (cM)
QTL Span:0.00-0.00 (cM)
0.9-0.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs324640280
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Suggestive
FDR0.075
Dominance effect:n/a
Additive effect:n/a
Associated Gene:FASN (fatty acid synthase)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Italian Large White pigs.
     Breeds associated:
    Design:Animals were genotyped for SNPs in ACLY, FASN, ACACA, and SCD genes and analyzed for carcass traits and backfat fatty acid composition.
    Analysis:Mixed models were used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Zappaterra M, Luise D, Zambonelli P, Mele M, Serra A, Costa LN, Davoli R
    Affiliation:Department of Agricultural and Food Sciences (DISTAL), University of Bologna, Viale Fanin 46, 40127 Bologna, Italy
    Title:Association study between backfat fatty acid composition and SNPs in candidate genes highlights the effect of FASN polymorphism in large white pigs
    Journal:Meat science, 2019, 156: 75-84
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #31132591
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  • Cite this Data:

    Animal QTLdb: QTL172588 was published in 2019, and was curated into QTLdb on 2019-07-09. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:172588

     

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