Release 56
(Apr 24, 2025)

QTL 17589 Description:

 Trait Information
Trait name: White blood cell number Vertebrate Trait Ontology: Leukocyte quantity
Reported name: White blood cell counts Product Trait Ontology: n/a
Symbol: WBC Clinical Measurement Ontology: Total white blood cell count
 QTL Map Information
Chromosome:7
QTL Peak Location:34.3 (cM)
QTL Span:17.91-18.00 (cM)
9.3-9.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.028
Dominance effect:n/a
Additive effect:n/a
Associated Gene:PSMB9 (proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2))
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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    •  QTL Experiment in Brief
    Animals:Animals were Large White, Landrace, and Songliao Black pigs.
     Breeds associated:
    n/a
    Design:Animals were genotyped for two SNPs each in PSMB8 and PSMB9 and analyzed for hematological traits.
    Analysis:Mixed models were used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Liu Y, Luo YR, Lu X, Qiu XT, Zhou JP, Gong YF, Ding XD, Zhang Q
    Affiliation:Key Laboratory Animal Genetics and Breeding of the Ministry of Agricultural, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China
    Title:Association analysis of polymorphisms of porcine LMP2 and LMP7 genes with haematological traits
    Journal:Mol Biol Rep, 2011, 38(7):4455-60
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:DQ65915:g.12115T>C
    User inputs on reference #21140225
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    • Cite this Data:

    Animal QTLdb: QTL17589 was published in 2011, and was curated into QTLdb on 2012-07-27. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:17589

     

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