| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 42 (cM) |
| QTL Span: | 21.37-21.57 (cM)
10.3-10.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.0017 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | PPARD (peroxisome proliferator-activated receptor delta) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #17820
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a White Duroc x Erhualian resource population and from outbred populations of seven breeds. |
| Breeds associated:
|
| Design: | Animals were genotyped for 6 microsatellites and 32 SNPs to refine a QTL region. PPARD was identified as a candidate gene in the region, and animals were genotyped for one SNP in PPARD and analyzed for ear size. |
| Analysis: | Standard association, marker-assisted association, and F-drop test were used. |
| Software: | SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ren J, Duan Y, Qiao R, Yao F, Zhang Z, Yang B, Guo Y, Xiao S, Wei R, Ouyang Z, Ding N, Ai H, Huang L |
| Affiliation: | Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, Nanchang, China |
| Title: | A missense mutation in PPARD causes a major QTL effect on ear size in pigs. |
| Journal: | PLoS genetics, 2011, 7(5): e1002043 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | G32E |
User inputs on reference #21573137
Add your comments
Note similar findings
Note contradictions
|
