| QTL Map Information |
|---|
| Chromosome: | 9 |
| QTL Peak Location: | 37.7 (cM) |
| QTL Span: | 20.16-20.17 (cM)
14.5-14.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | 0.0039 |
| Additive effect: | 0.016 |
| Associated Gene: | MMP3 (matrix metallopeptidase 3 (stromelysin 1, progelatinase)) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duroc x Pietrain cross-bred pigs or commercial animals from Large White x Landrace dam lines and Large White x Duroc sire lines. |
| Breeds associated:
|
| Design: | Animals were genotyped for one SNP in each of MMP3, TGFB1, and COL10A1 and analyzed for leg weakness-related traits. |
| Analysis: | The general linear model procedure was used. |
| Software: | SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Laenoi W, Rangkasenee N, Uddin MJ, Cinar MU, Phatsara C, Tesfaye D, Scholz AM, Tholen E, Looft C, Mielenz M, Sauerwein H, Wimmer |
| Affiliation: | Institute of Animal Science, Animal Breeding and Husbandry Group, University of Bonn, Endenicher allee 15, 53115, Bonn, Germany |
| Title: | Association and expression study of MMP3, TGFβ1 and COL10A1 as candidate genes for leg weakness-related traits in pigs |
| Journal: | Mol Biol Rep, 2012, 39(4):3893-901 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | g.158C>T |
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