Release 56
(Apr 24, 2025)

QTL 180414 Description:

 Trait Information
Trait name: Meat color Vertebrate Trait Ontology: n/a
Trait details: gluteus medius Minolta a* value Product Trait Ontology: Meat color
Symbol: MCOL Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:3
QTL Peak Location:0.00 (cM)
QTL Span:0.00-0.00 (cM)
112.6-112.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs330820437
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
FDR0.00196
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SELENOI (selenoprotein I)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Duroc pigs.
     Breeds associated:
    Design:Animals were genotyped for 19 selected SNPs from 14 genes and analyzed for meat quality traits.
    Analysis:Mixed models were used
    Software:GEMMA
    Notes: 
    Links:Edit

     Reference
    Authors:Mármol-Sánchez E, Quintanilla R, Jordana J, Amills M
    Affiliation:Department of Animal Genetics, Centre for Research in Agricultural Genomics, CSIC-IRTA-UAB-UB, Universitat Autònoma de Barcelona, Bellaterra, 08193, Spain
    Title:An association analysis for 14 candidate genes mapping to meat quality quantitative trait loci in a Duroc pig population reveals that the ATP1A2 genotype is highly associated with muscle electric conductivity
    Journal:Animal genetics, 2020, 51(1):95-100
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #31633210
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  • Cite this Data:

    Animal QTLdb: QTL180414 was published in 2020, and was curated into QTLdb on 2019-10-28. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:180414

     

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