| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 64.34 (cM) |
| QTL Span: | 64.34-64.34 (cM)
54.4-54.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs196955318 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | 0.42 |
| Additive effect: | -0.25 |
| Associated Gene: | PLCZ (phospholipase c-zeta) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Pietrain and Pietrain x Hampshire crossbred boars. |
| Breeds associated:
|
| Design: | Animals were genotyped for SNPs in PLCZ and PTGS2 (COX2) and analyzed for sperm quality traits. |
| Analysis: | The mixed and general linear model procedures were used. |
| Software: | SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Kaewmala K, Uddin M J, Cinar M U, Große-Brinkhaus C, Jonas E, Tesfaye D, Phatsara C, Tholen E, Looft C, Schellander K, |
| Affiliation: | Institute of Animal Science, University of Bonn, Bonn, Germany. |
| Title: | Investigation into association and expression of PLCz and COX-2 as candidate genes for boar sperm quality and fertility. |
| Journal: | Reproduction in domestic animals , 2012, 47 (2): 213-23 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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