| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 78.56 (cM) |
| QTL Span: | 78.56-78.56 (cM)
79.9-79.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs45432189 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | -1.46 |
| Additive effect: | -2.77 |
| Associated Gene: | HSPG2 (heparan sulfate proteoglycan 2) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a commercial purebred Duroc population. |
| Breeds associated:
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| Design: | Animals were genotyped for 81 SNPs in 80 candidate genes mapped to putative QTL regions from a previous study. Association analysis for 33 of the SNP with meat quality traits was performed. |
| Analysis: | Linear mixed models were used. |
| Software: | SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Choi I, Bates RO, Raney NE, Steibel JP, Ernst CW |
| Affiliation: | Department of Animal Science, Michigan State University, East Lansing, MI 48824-1225, USA. |
| Title: | Evaluation of QTL for carcass merit and meat quality traits in a US commercial Duroc population. |
| Journal: | Meat science, 2012, 92 (2): 132-8 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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