| QTL Map Information |
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| Chromosome: | 7 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
28.6-28.6 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80831499 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.66E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | PRIM2 (primase, DNA, polypeptide 2 (58kDa)) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | Animals were American and Canadian Duroc pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the Neogen Geneseek Porcine 50K SNP chip and analyzed for average daily gain and lean meat percentage. |
| Analysis: | Within-population GWAS were performed using a univariate linear mixed model. Meta-analysis was conducted by combining single-population GWAS analysis. |
| Software: | PLINK v1.9, GCTA, GEMMA, METAL, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhou S, Ding R, Meng F, Wang X, Zhuang Z, Quan J, Geng Q, Wu J, Zheng E, Wu Z, Yang J, Yang J |
| Affiliation: | College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou, 510642, Guangdong, People's Republic of China |
| Title: | A meta-analysis of genome-wide association studies for average daily gain and lean meat percentage in two Duroc pig populations |
| Journal: | BMC genomics, 2021, 22(1): 12 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
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| Comments: | meta-analysis |
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