Release 56
(Apr 24, 2025)

QTL 23614 Description:

 Trait Information
Trait name: Muscle pH Vertebrate Trait Ontology: Muscle pH regulation trait
Trait details: pH at 24 hr post-mortem (loin) Product Trait Ontology: Meat pH
Symbol: MPH Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:14
QTL Peak Location:30.74 (cM)
QTL Span:30.74-30.74 (cM)
40.9-40.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs80793442
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.026
Dominance effect:-0.05
Additive effect:-0.01
Associated Gene:HNF1A (HNF1 homeobox A)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Duroc x Pietrain and Pietrain pigs.
     Breeds associated:
    Design:Animals were genotyped for a SNP in HNF1A and analyzed for meat and carcass traits.
    Analysis:A generalized linear model was used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Kayan A, Uddin MJ, Kocamis H, Tesfaye D, Looft C, Tholen E, Schellander K, Cinar MU
    Affiliation:Institute of Animal Science, Animal Breeding and Husbandry Group, University of Bonn, 53115 Bonn, Germany.
    Title:Association and expression analysis of porcine HNF1A gene related to meat and carcass quality traits.
    Journal:Meat science, 2013, 94 (4): 474-9
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #23628452
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  • Cite this Data:

    Animal QTLdb: QTL23614 was published in 2013, and was curated into QTLdb on 2014-01-17. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:23614

     

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