Release 56
(Apr 24, 2025)

QTL 237643 Description:

 Trait Information
Trait name: Palmitic acid content Vertebrate Trait Ontology: n/a
Reported name: (n/a) Product Trait Ontology: Meat fatty acid C16:0 content
Symbol: FA-C16:0 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:3
QTL Peak Location:n/a
QTL Span:n/a
43.7-43.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs343140378
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:Comparison-wise
Threshold significance level:Significant
P_values0.0270
Dominance effect:n/a
Additive effect:n/a
Associated Gene:IL1A (interleukin 1 alpha)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Pigs were from a stock of crossbred Duroc and Large White x Landrace reared under commercial conditions.
     Breeds associated:
    Design:Animals were genotyped for four SNPs in the IL1A and IL-6 genes, and association analysis was performed for intramuscular fat and fatty acid composition traits.
    Analysis:The general linear model was used.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:Pothakam N, Supakankul P, Norseeda W, Liu G, Teltathum T, Naraballobh W, Khamlor T, Sringarm K, Mekchay S
    Affiliation:Department of Animal and Aquatic Sciences, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand
    Title:Association of adipocytokine IL-1A and IL-6 genes with intramuscular fat content and fatty acid composition in pigs
    Journal:Meat science, 2021, 179: 108554
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #34000609
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  • Cite this Data:

    Animal QTLdb: QTL237643 was published in 2021, and was curated into QTLdb on 2021-10-06. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:237643

     

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