| QTL Map Information |
|---|
| Chromosome: | 9 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
10.1-10.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs3472408443 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.0001 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | DGAT2 (diacylglycerol O-acyltransferase 2) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duroc pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using either the PorcineSNP60 v2 BeadChip or the GGP Porcine HD array, and GWAS was performed for muscle fatty acid composition. A total of 36,000 SNPs were used for analysis. Following GWAS, candidate regions were analyzed further. |
| Analysis: | A linear mixed model was used. |
| Software: | GEMMA, GATK HaplotypeCaller 3.8.0 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Solé E, Ros-Freixedes R, Tor M, Pena RN, Estany J |
| Affiliation: | Department of Animal Science, University of Lleida-Agrotecnio-CERCA Center, 191 Rovira Roure, 25198, Lleida, Catalonia, Spain |
| Title: | A sequence variant in the diacylglycerol O-acyltransferase 2 gene influences palmitoleic acid content in pig muscle |
| Journal: | Scientific reports, 2021, 11(1):14797 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | ss7315407085 |
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