| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
106.4-106.4 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs326930490 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 4.8% | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | GREB1L (GREB1 like retinoic acid receptor coactivator) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Beijing Black pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina PorcineSNP50 BeadChip, and GWAS was performed for rib number. A total of 35,298 SNPs were used for analysis. |
| Analysis: | A mixed linear model was used for GWAS. |
| Software: | DMU, TASSEL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Niu N, Liu Q, Hou X, Liu X, Wang L, Zhao F, Gao H, Shi L, Wang L, Zhang L |
| Affiliation: | Key Laboratory of Animal (Poultry) Genetics Breeding and Reproduction, Ministry of Agriculture, Department of Animal Genetics and Breeding, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China |
| Title: | Genome-wide association study revealed ABCD4 on SSC7 and GREB1L and MIB1 on SSC6 as crucial candidate genes for rib number in Beijing Black pigs |
| Journal: | Animal Genetics, 2022, 53(5):690-695 |
| Links: |
PubMed | Abstract | List all data
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