| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
30.0-30.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs344104170 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 2.54E-09 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #262733
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Pigs were from a Large White x Tongcheng advanced generation intercross population. |
| Breeds associated:
|
| Design: | Whole genome sequencing was performed, and GWAS were carried out for backfat thickness, skin thickness, and carcass weight. A total of 12,770,230 SNPs were used for analysis. |
| Analysis: | A linear regression model was used for ANOVA. |
| Software: | PLINK v1.90, GCTA, rMVP, LDBlockShow, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Fu M, Zhou X, Liu Z, Wang T, Liu B |
| Affiliation: | Key Laboratory of Agricultural Animal Genetics, Breeding, and Reproduction of Ministry of Education and Key Laboratory of Swine Genetics and Breeding of Ministry of Agriculture, Huazhong Agricultural University, Wuhan, China |
| Title: | Genome-wide association study reveals a genomic region on SSC7 simultaneously associated with backfat thickness, skin thickness and carcass length in a Large White × Tongcheng advanced generation intercross resource population |
| Journal: | Animal Genetics, 2023, 54(2):216-219 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #36511585
Add your comments
Note similar findings
Note contradictions
|
