| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
125.0-125.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs340014762 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | <0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a Duroc x Landrace x Large White crossbred pig population. |
| Breeds associated:
|
| Design: | Animals were genotyped using the GeneSeek Porcine 50K SNP chip, and GWAS were performed for flesh color and intramuscular fat. A total of 28,066 SNPs were used for analysis. |
| Analysis: | An efficient mixed linear model was used. |
| Software: | PLINK v1.90, GCTA v1.92, GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Li H, Xu C, Meng F, Yao Z, Fan Z, Yang Y, Meng X, Zhan Y, Sun Y, Ma F, Yang J, Yang M, Yang J, Wu Z, Cai G, Zheng E |
| Affiliation: | College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangzhou 510642, China |
| Title: | Genome-Wide Association Studies for Flesh Color and Intramuscular Fat in (Duroc × Landrace × Large White) Crossbred Commercial Pigs |
| Journal: | Genes, 2022, 13(11):2131 |
| Links: |
PubMed | Abstract | List all data
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