Release 56
(Apr 24, 2025)

QTL 28078 Description:

 Trait Information
Trait name: Residual feed intake Vertebrate Trait Ontology: Food intake trait
Reported name: Residual feed intake Product Trait Ontology: n/a
Symbol: RFI Clinical Measurement Ontology: Residual feed intake
 QTL Map Information
Chromosome:13
QTL Peak Location:15.85 (cM)
QTL Span:14.48-17.22 (cM)
22.4-26.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs81478275
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:HLCS (holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase))
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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    •  QTL Experiment in Brief
    Animals:Animals were Duroc pigs.
     Breeds associated:
    Design:Animals were genotyped using the Illumina PorcineSNP60 iSelect BeadChip and analyzed for growth and feed intake traits. A total of 33241 SNPs were used for analysis.
    Analysis:A linear mixed model was used.
    Software:DMU, Haploview
    Notes: 
    Links:Edit

     Reference
    Authors:Do DN, Ostersen T, Strathe AB, Mark T, Jensen J, Kadarmideen HN
    Affiliation:Section of Animal Genetics, Bioinformatics and Breeding, Department of Veterinary Clinical and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, 1870 Frederiksberg C, Denmark
    Title:Genome-wide association and systems genetic analyses of residual feed intake, daily feed consumption, backfat and weight gain in pigs
    Journal:BMC genetics, 2014, 15: 27
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:BWd, ADG, and backfat used as regressors
    User inputs on reference #24533460
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    • Cite this Data:

    Animal QTLdb: QTL28078 was published in 2014, and was curated into QTLdb on 2014-06-13. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:28078

     

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